Welcome to Abhineet Ram’s Portfolio!

About me:

• Abhineet
  • Professional
• Resume

Data and Image Analysis:

• Deciphering the History of ERK Activity from Fixed-Cell Immunofluorescence Measurements
  • Abstract
  • A dataset linking live-cell ERK activity to ERK target immunofluorescence
  • Regression modeling
  • Neural network-based models
  • Classification models
  • Systems biology and ODE modeling
  • Discussion
• Spectral Unmixing
  • How it works
  • Code Availability
• Automated Cell Cluster Detection
  • Workflow
  • Nuclear segmentation

Bioinformatics:

• MCF10A RNA sequencing
  • DESeq2
  • PCA and batch correction
  • Distance matrix
  • Differential expression analysis
  • GSEA
  • Acknowledgements
  • Code Availability

Tutorials:

• Principal Component Analysis

Indices and tables

• Index

• Module Index

• Search Page